Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103463744Si:dkey-183n20.15. (214 aa)    
Predicted Functional Partners:
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
      
 0.503
blm
BLM RecQ like helicase.
    
 
 0.496
recql4
RecQ helicase-like 4.
    
 
 0.496
LOC103469761
Cholesterol 25-hydroxylase like 3.
    
 
 0.479
LOC103476975
ER lipid raft associated 1.
    
 
 0.479
rad52
RAD52 homolog, DNA repair protein.
    
 
 0.469
gmfg
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
   
  
 0.461
gmfb
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
   
  
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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