Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
LOC103458088Small nuclear RNA activating complex, polypeptide 1b. (362 aa)    
Predicted Functional Partners:
snapc3
Small nuclear RNA activating complex, polypeptide 3.
    
 0.999
snapc2
Uncharacterized protein.
    
 0.999
snapc5
Small nuclear RNA activating complex, polypeptide 5.
    
 0.999
snapc4
Uncharacterized protein.
    
 0.999
bdp1
SANT domain-containing protein.
    
 0.957
gtf2b
General transcription factor IIB.
    
 0.942
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
    
 0.892
POLR2E
RNA polymerase II subunit E.
   
  0.880
gtf2a2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.876
brf2
BRF2 RNA polymerase III transcription initiation factor subunit.
   
 0.875
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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