STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grm1Glutamate receptor, metabotropic 1a. (1157 aa)    
Predicted Functional Partners:
LOC103470410
Homer scaffold protein 1b.
    
 0.981
HOMER1
Homer scaffold protein 1.
    
 0.981
LOC103479257
WH1 domain-containing protein.
    
 0.977
LOC103463549
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.933
LOC103470235
Uncharacterized protein.
    
 0.933
HOMER2
Homer scaffold protein 2.
    
  0.923
LOC103463335
Homer scaffold protein 3b.
    
  0.918
LOC103473464
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.908
LOC103473465
G protein subunit alpha q.
    
 0.908
LOC103458356
Glutamate receptor, metabotropic 1b.
  
  
 
0.907
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.