STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ndrg4NDRG family member 4. (437 aa)    
Predicted Functional Partners:
gins3
GINS complex subunit 3.
      
 0.597
RNF207
Ring finger protein 207a.
      
 0.499
LOC103457471
MYCN proto-oncogene, bHLH transcription factor.
    
 
 0.498
Cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase).
     
 0.468
LOC103478962
Mohawk homeobox b.
   
  
 0.467
rnf11
Ring finger protein 11b.
      
 0.460
lnx2
Ligand of numb-protein X 2a.
    
 
 0.452
tomm34
Translocase of outer mitochondrial membrane 34.
      
 0.435
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
   
 
 0.425
ENSPREP00000007278
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.