STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473507Proprotein convertase subtilisin/kexin type 5a. (861 aa)    
Predicted Functional Partners:
ENSPREP00000030480
Uncharacterized protein.
 
     
0.695
mbtps1
Membrane-bound transcription factor peptidase, site 1.
      
 0.674
LOC103464694
Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.
     
  0.545
pros1
Protein S.
     
  0.491
LOC103475119
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.479
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
 
 0.465
gas6
Uncharacterized protein.
   
  0.464
thoc2
THO complex 2.
      
 0.449
sil1
SIL1 nucleotide exchange factor.
   
 
 0.445
POMC
Proopiomelanocortin.
    
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.