STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd99l2CD99 molecule-like 2. (228 aa)    
Predicted Functional Partners:
LOC103477319
CD99 molecule.
  
  
0.979
wdr54
WD repeat domain 54.
      
 0.549
ptgfrn
Uncharacterized protein.
      
 0.549
nab1
NGFI-A binding protein 1a (EGR1 binding protein 1).
      
 0.549
cd34
Uncharacterized protein.
   
  
 0.501
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
  
 0.480
asmtl
Acetylserotonin O-methyltransferase-like.
      
 0.471
ewsr1
EWS RNA-binding protein 1b.
      
 0.468
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.441
Unc79
Uncharacterized protein.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.