STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cav1Uncharacterized protein. (84 aa)    
Predicted Functional Partners:
cav2
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
   
 0.987
LOC103482185
Caveolae associated protein 1b.
   
 0.853
LOC103469402
Caveolae associated protein 1a.
   
 0.853
eea1
Early endosome antigen 1.
      
 0.836
txndc11
Thioredoxin domain containing 11.
    
  0.759
duoxa1
Dual oxidase 2.
     
 0.750
pxdn
Peroxidasin.
   
 0.713
nos1
Nitric oxide synthase 1 (neuronal).
    
 0.681
adar
Adenosine deaminase RNA specific.
      
 0.658
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.651
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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