STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kcnma1Potassium calcium-activated channel subfamily M alpha 1. (1118 aa)    
Predicted Functional Partners:
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 
 0.674
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.611
LOC103463443
Thromboxane A2 receptor.
    
 
 0.550
LOC103463442
Thromboxane A2 receptor.
    
 
 0.550
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
      
 0.527
LOC103463721
RAB11B, member RAS oncogene family, b.
    
   0.519
LOC103463719
RAB11B, member RAS oncogene family, a.
    
   0.519
LOC103460107
RAB11a, member RAS oncogene family.
    
   0.519
LOC103479314
Uncharacterized protein.
    
   0.519
LOC103477555
RAB11a, member RAS oncogene family, like.
    
   0.519
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.