STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477733Ets variant 2. (339 aa)    
Predicted Functional Partners:
LOC103477443
Runt-related transcription factor.
   
 0.836
jarid2
Jumonji, AT rich interactive domain 2b.
      
 0.730
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 
 0.724
LOC103465574
Inhibitor of DNA binding 1, HLH protein.
     
 0.679
runx3
Runt-related transcription factor.
   
 0.654
LOC103457845
Runt-related transcription factor.
   
 0.654
Tal1
BHLH domain-containing protein.
    
 0.650
LOC103479412
T-cell acute lymphocytic leukemia 1.
    
 0.650
LOC103464091
CREB binding protein a.
    
 
 0.644
crebbp
CREB binding protein b.
    
 
 0.644
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.