STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesTestis derived transcript (3 LIM domains). (595 aa)    
Predicted Functional Partners:
ENSPREP00000005826
Vasodilator stimulated phosphoprotein b.
   
 0.578
ENSPREP00000023386
VASP_tetra domain-containing protein.
   
 0.578
ENSPREP00000023411
WH1 domain-containing protein.
   
 0.578
EVL
Enah/Vasp-like.
   
 0.578
LOC103476358
Vasodilator stimulated phosphoprotein a.
   
 0.578
Enah
WH1 domain-containing protein.
   
 0.578
ENSPREP00000029973
VASP_tetra domain-containing protein.
   
 0.578
iah1
Isoamyl acetate hydrolyzing esterase 1 (putative).
      
 0.476
ERMP1
Endoplasmic reticulum metallopeptidase 1.
    
 
 0.475
VANGL2
VANGL planar cell polarity protein 2.
    
 0.446
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.