STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480834C2H2-type domain-containing protein. (698 aa)    
Predicted Functional Partners:
rbbp4
Retinoblastoma binding protein 4.
    
 0.616
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.616
LOC103472130
Human immunodeficiency virus type I enhancer binding protein 3a.
  
     0.526
LOC103470121
Leucine zipper, putative tumor suppressor family member 3b.
  
 
  0.484
LOC103479352
Uncharacterized protein.
  
 
  0.469
KRT222
Keratin 222; Belongs to the intermediate filament family.
  
 
  0.459
LOC103457670
Uncharacterized protein.
  
 
   0.455
LOC103472856
Shisa family member 7.
  
 
  0.452
aknad1
Uncharacterized protein.
  
     0.445
dclre1b
DNA cross-link repair 1B.
    
 
 0.427
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.