STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477734Fli-1 proto-oncogene, ETS transcription factor b. (492 aa)    
Predicted Functional Partners:
spi1
Spi-1 proto-oncogene b.
   
 0.605
runx3
Runt-related transcription factor.
   
 0.546
LOC103457845
Runt-related transcription factor.
   
 0.546
LOC103477443
Runt-related transcription factor.
   
 0.546
LOC103476608
Runt domain-containing protein.
   
 0.526
Tal1
BHLH domain-containing protein.
    
 0.506
LOC103479412
T-cell acute lymphocytic leukemia 1.
    
 0.506
LOC103476642
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.493
Npas1
Neuronal PAS domain protein 1.
   
 
 0.479
cbfb
Core-binding factor subunit beta.
    
 0.452
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.