STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466287SCY domain-containing protein. (143 aa)    
Predicted Functional Partners:
LOC103478366
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
    
 0.922
LOC103478363
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.922
irf5
Interferon regulatory factor 5.
     
  0.900
tnfaip6
Tumor necrosis factor, alpha-induced protein 6.
    
 
 0.495
smim13
Small integral membrane protein 13.
      
 0.486
ENSPREP00000019776
C-C motif chemokine.
    
 0.480
LOC103465399
Uncharacterized protein.
      
 0.453
ackr4
Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family.
  
 0.451
ENSPREP00000005219
SCY domain-containing protein.
   
 0.446
LOC103479771
Chemokine (C-C motif) ligand 25a.
     
 0.436
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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