STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466287SCY domain-containing protein. (143 aa)    
Predicted Functional Partners:
LOC103469546
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.574
ENSPREP00000019776
C-C motif chemokine.
    
 0.529
ENSPREP00000005219
SCY domain-containing protein.
   
 0.491
LOC103464854
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 0.488
ENSPREP00000031720
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
   
 0.488
LOC103475941
C-X-C motif chemokine.
    
 0.469
ackr4
Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family.
  
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.