STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460553Stork_head domain-containing protein. (926 aa)    
Predicted Functional Partners:
LOC103461610
Odorant receptor, family E, subfamily 124, member 1.
      
 0.584
trappc11
Trafficking protein particle complex 11.
      
 0.575
nepro
Nucleolus and neural progenitor protein.
      
 0.568
tmem145
Transmembrane protein 145.
      
 0.565
prss56
Serine protease 56; Belongs to the peptidase S1 family.
      
 0.516
fam110b
Uncharacterized protein.
    
   0.505
pwwp2b
PWWP domain containing 2B.
      
 0.503
LOC103470988
UV-stimulated scaffold protein A.
      
 0.502
ccar1
Cell division cycle and apoptosis regulator 1.
      
 0.459
maip1
Matrix AAA peptidase interacting protein 1.
      
 0.455
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.