STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COMTD1Catechol-O-methyltransferase domain containing 1. (257 aa)    
Predicted Functional Partners:
tk1
Thymidine kinase.
  
 
  0.621
dus2
Dihydrouridine synthase 2.
  
  
 0.613
Map6d1
MAP6 domain containing 1.
    
 
 0.593
LOC103462782
GC-rich sequence DNA-binding factor 2.
      
 0.569
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
      
 0.567
Tymp
Thymidine phosphorylase.
     
  0.566
LOC103473231
Zgc:56235.
   
  
 0.547
VDAC2
Voltage dependent anion channel 2.
   
  
 0.539
LOC103476817
Voltage-dependent anion channel 2.
   
  
 0.539
LOC103481890
Cytochrome c oxidase assembly homolog 11 (yeast).
   
  
 0.509
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.