STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
thap4THAP domain containing 4. (170 aa)    
Predicted Functional Partners:
ENSPREP00000033386
Ankyrin repeat and MYND domain containing 1.
      
 0.727
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.620
ptpmt1
Protein tyrosine phosphatase mitochondrial 1.
   
  
 0.606
LOC103476129
THAP domain containing 12a.
      
 0.588
LOC103474225
THAP domain containing 12b.
      
 0.588
rfxank
Regulatory factor X-associated ankyrin-containing protein.
      
 0.585
KCNA10
Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family.
      
 0.571
KCNA10-2
Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family.
      
 0.571
hdlbp
High density lipoprotein binding protein a.
      
 0.569
ENSPREP00000021656
Zgc:113162.
      
 0.535
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.