STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478537Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
LOC103478535
Paraoxonase 1.
   
  0.966
nfyc
Nuclear transcription factor Y, gamma.
    
   0.904
lcat
Lecithin-cholesterol acyltransferase.
   
  
 0.649
cetp
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
      
 0.645
ENSPREP00000033412
Peptidase S1 domain-containing protein.
   
  
 0.620
LOC103477848
Apolipoprotein Eb.
   
  
 0.619
mgst1
Microsomal glutathione S-transferase 1.2.
   
  
 0.589
apof
Apolipoprotein F.
   
  
 0.554
LOC103477850
Uncharacterized protein.
   
  
 0.503
LOC103477849
Uncharacterized protein.
   
  
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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