STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473466Heterogeneous nuclear ribonucleoprotein K, like. (431 aa)    
Predicted Functional Partners:
LOC103480306
RRM domain-containing protein.
   
 0.983
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.983
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.972
Hnrnpa1
RRM domain-containing protein.
   
 0.972
rbmx
RNA binding motif protein X-linked.
   
 0.967
ENSPREP00000028243
B30.2/SPRY domain-containing protein.
   
 0.964
LOC103479538
RRM domain-containing protein.
   
 0.937
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
  
  
 
0.901
LOC103464577
RRM domain-containing protein.
   
 0.780
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.780
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.