STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtx3Metaxin. (307 aa)    
Predicted Functional Partners:
LOC103465699
SAMM50 sorting and assembly machinery component.
   
 0.924
LOC103459709
Sorting and assembly machinery component 50 homolog, like.
   
 0.924
mtx2
Metaxin 2.
    
0.849
LOC103473020
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.788
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.788
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.788
ENSPREP00000023296
Uncharacterized protein.
    
 0.755
tomm20
Translocase of outer mitochondrial membrane 20b.
    
 0.737
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.733
LOC103472957
PVR cell adhesion molecule related 2 like.
   
 0.719
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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