STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtx3Metaxin. (307 aa)    
Predicted Functional Partners:
mtx2
Metaxin 2.
   
0.995
LOC103465699
SAMM50 sorting and assembly machinery component.
   
 0.906
LOC103459709
Sorting and assembly machinery component 50 homolog, like.
   
 0.906
LOC103477526
Metaxin 1a.
  
  
 
0.906
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.903
tomm20
Translocase of outer mitochondrial membrane 20b.
    
 0.902
ENSPREP00000023296
Uncharacterized protein.
    
 0.879
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.783
LOC103473020
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.760
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.760
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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