STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476427Synaptopodin 2-like a. (1102 aa)    
Predicted Functional Partners:
ptk2
Protein tyrosine kinase 2ab; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.495
LOC103475221
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.495
LOC103472469
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.495
LOC103457606
Protein tyrosine kinase 2 beta, b; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.495
vcl
Vinculin b.
   
 0.489
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.489
LOC103471147
Catenin (cadherin-associated protein), alpha 1.
   
 0.489
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.489
ENSPREP00000028495
Uncharacterized protein.
   
 0.489
LOC103476978
Vinculin a.
   
 0.489
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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