STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103463615RAS protein activator like 3. (1172 aa)    
Predicted Functional Partners:
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
 0.570
rrad
Ras-related associated with diabetes.
    
 0.550
nf1
Neurofibromin 1b.
   
 0.544
LOC103461187
Rho guanine nucleotide exchange factor (GEF) 3, like.
   
  
 0.537
arhgap5
Rho GTPase activating protein 5.
   
 0.527
LOC103475743
Rho GTPase activating protein 35b.
   
 0.527
arhgap35
Uncharacterized protein.
   
 0.527
arhgef18
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
    
 
 0.526
ANKS1A
Ankyrin repeat and sterile alpha motif domain containing 1A.
   
 
 0.521
anks1b
Ankyrin repeat and sterile alpha motif domain containing 1B.
   
 
 0.521
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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