STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004076Lipoxygenase domain-containing protein. (423 aa)    
Predicted Functional Partners:
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 0.857
cotl1
Coactosin-like F-actin binding protein 1.
    
 
 0.831
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
  0.677
rnf215
Ring finger protein 215.
    
 
 0.580
ints1
Integrator complex subunit 1.
    
 0.518
ints9
Integrator complex subunit 9.
    
 0.514
ints11
Integrator complex subunit 11.
    
 0.507
ints13
Integrator complex subunit 13.
    
 0.485
ENSPREP00000026079
Integrator complex subunit 4.
    
 0.479
ints7
Integrator complex subunit 7.
    
 0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.