wdr13 protein (Poecilia reticulata) - STRING interaction network

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Score

wdr13

WD repeat domain 13. (393 aa)

Predicted Functional Partners:

Unc79

0.768

LOC103467702

0.751

smim20

0.716

suv39h1

0.663

LOC103466967

0.621

tbc1d25

0.549

ebpl

0.549

ftsj1

0.537

LOC103461037

0.533

rho

0.514

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103461037	wdr13	ENSPREP00000019992	ENSPREP00000004097	RAN binding protein 2.	WD repeat domain 13.	0.533
LOC103466967	LOC103467702	ENSPREP00000012165	ENSPREP00000004143	Fork-head domain-containing protein.	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	0.621
LOC103466967	wdr13	ENSPREP00000012165	ENSPREP00000004097	Fork-head domain-containing protein.	WD repeat domain 13.	0.621
LOC103467702	LOC103466967	ENSPREP00000004143	ENSPREP00000012165	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	Fork-head domain-containing protein.	0.621
LOC103467702	rho	ENSPREP00000004143	ENSPREP00000024057	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	0.568
LOC103467702	smim20	ENSPREP00000004143	ENSPREP00000016545	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	Small integral membrane protein 20.	0.671
LOC103467702	suv39h1	ENSPREP00000004143	ENSPREP00000012183	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.607
LOC103467702	wdr13	ENSPREP00000004143	ENSPREP00000004097	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	WD repeat domain 13.	0.751
Unc79	wdr13	ENSPREP00000021607	ENSPREP00000004097	Uncharacterized protein.	WD repeat domain 13.	0.768
ebpl	ftsj1	ENSPREP00000016036	ENSPREP00000024618	EBP like.	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	0.549
ebpl	tbc1d25	ENSPREP00000016036	ENSPREP00000013357	EBP like.	TBC1 domain family, member 25.	0.549
ebpl	wdr13	ENSPREP00000016036	ENSPREP00000004097	EBP like.	WD repeat domain 13.	0.549
ftsj1	ebpl	ENSPREP00000024618	ENSPREP00000016036	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	EBP like.	0.549
ftsj1	tbc1d25	ENSPREP00000024618	ENSPREP00000013357	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	TBC1 domain family, member 25.	0.549
ftsj1	wdr13	ENSPREP00000024618	ENSPREP00000004097	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	WD repeat domain 13.	0.537
rho	LOC103467702	ENSPREP00000024057	ENSPREP00000004143	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	0.568
rho	smim20	ENSPREP00000024057	ENSPREP00000016545	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	Small integral membrane protein 20.	0.436
rho	wdr13	ENSPREP00000024057	ENSPREP00000004097	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	WD repeat domain 13.	0.514
smim20	LOC103467702	ENSPREP00000016545	ENSPREP00000004143	Small integral membrane protein 20.	Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.	0.671
smim20	rho	ENSPREP00000016545	ENSPREP00000024057	Small integral membrane protein 20.	Rhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity).	0.436