STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc10a7Solute carrier family 10 member 7. (376 aa)    
Predicted Functional Partners:
rspry1
Ring finger and SPRY domain containing 1.
      
 0.799
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.721
slc10a4
Solute carrier family 10 member 4.
      
 0.680
LOC103466846
Solute carrier family 10 member 3.
      
 0.651
COG5
Component of oligomeric golgi complex 5.
      
 0.637
ENSPREP00000020872
Uncharacterized protein.
      
 0.634
cog7
Component of oligomeric golgi complex 7.
      
 0.631
slc10a2
Solute carrier family 10 member 2.
      
 0.628
LOC103457349
Solute carrier family 10 member 1.
      
 0.603
dis3
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
  
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.