STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc20Cell division cycle 20 homolog. (555 aa)    
Predicted Functional Partners:
pttg1
Uncharacterized protein.
   
 0.998
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
 0.997
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.996
nek2
NIMA-related kinase 2.
   
 0.995
cdc27
Cell division cycle 27.
   
 0.995
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.995
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.995
anapc10
Anaphase promoting complex subunit 10.
    
 0.993
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
   
 0.993
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
   
 0.992
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.