STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdc20Cell division cycle 20 homolog. (555 aa)    
Predicted Functional Partners:
fbxo5
F-box protein 5.
   
 0.999
LOC103474790
Cyclin N-terminal domain containing 2; Belongs to the cyclin family.
   
 0.999
bub3
BUB3 mitotic checkpoint protein.
   
 0.999
pttg1
Uncharacterized protein.
   
 0.999
ccnb1
Cyclin B1; Belongs to the cyclin family.
   
 0.999
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.999
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.999
mad1l1
Mitotic arrest deficient 1 like 1.
   
 0.998
nek2
NIMA-related kinase 2.
   
 0.998
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.998
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.