STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fgl1Fibrinogen C-terminal domain-containing protein. (294 aa)    
Predicted Functional Partners:
fgg
Fibrinogen gamma chain.
   
 
 
0.829
APOH
Uncharacterized protein.
   
 0.807
APOH-2
Apolipoprotein H.
   
 0.807
fga
Fibrinogen alpha chain.
   
 
0.804
ENSPREP00000032122
Uncharacterized protein.
 
   
  0.800
tube1
Tubulin, epsilon 1; Belongs to the tubulin family.
    
   0.792
LOC103477883
ETHE1 persulfide dioxygenase.
    
   0.790
LOC103478004
Uncharacterized protein.
    
 
 0.729
fgb
Fibrinogen beta chain.
  
 
0.698
lcmt2
Leucine carboxyl methyltransferase 2.
    
   0.656
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.