STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481478Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (197 aa)    
Predicted Functional Partners:
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 
 0.688
LOC103476979
AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes; Belongs to the adaptor complexes medium subunit family.
   
  
 0.683
LOC103474700
Arylacetamide deacetylase.
   
  
 0.681
TPPP
Tubulin polymerization promoting protein.
   
  
 0.648
LOC103470036
Tubulin polymerization-promoting protein family member 2.
      
 0.646
npr3
Natriuretic peptide receptor 3.
      
 0.524
mrm1
Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae).
   
  
 0.485
SAMD8
Sterile alpha motif domain containing 8.
      
 0.473
LOC103476985
SAM domain-containing protein.
      
 0.473
Vrk3
VRK serine/threonine kinase 3.
    
 0.426
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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