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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hepacam2HEPACAM family member 2. (412 aa)    
Predicted Functional Partners:
vps50
VPS50 EARP/GARPII complex subunit.
 
    
 0.625
snx13
Sorting nexin 13.
    
 
 0.576
FBXO43
F-box protein 43.
    
 
 0.559
LOC103475332
Interferon regulatory factor.
   
 0.550
kcnq1
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
   
  0.538
ENSPREP00000028578
Ion_trans domain-containing protein; Belongs to the potassium channel family.
   
  0.538
Znf516
Uncharacterized protein.
  
 
  0.516
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
     
 0.505
ift81
Intraflagellar transport 81 homolog.
    
 0.493
Pum2
Uncharacterized protein.
  
 
  0.482
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.