STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hepacam2HEPACAM family member 2. (412 aa)    
Predicted Functional Partners:
vps50
VPS50 EARP/GARPII complex subunit.
 
    
 0.770
LOC103475332
Interferon regulatory factor.
    
 0.675
ugcg
UDP-glucose ceramide glucosyltransferase.
  
   0.661
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
     
 0.620
dffb
DNA fragmentation factor, beta polypeptide (caspase-activated DNase).
    
 
 0.600
LOC103473338
Tumor necrosis factor receptor superfamily, member a.
    
   0.577
snx13
Sorting nexin 13.
    
 
 0.533
ENSPREP00000031054
RELT TNF receptor.
    
  0.529
Znf516
Uncharacterized protein.
  
 
  0.495
txndc11
Thioredoxin domain containing 11.
    
 0.490
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.