STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
opn3Opsin 3. (490 aa)    
Predicted Functional Partners:
eif2b2
Eukaryotic translation initiation factor 2B, subunit 2 beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.940
eif2b3
Eukaryotic translation initiation factor 2B, subunit 3 gamma.
    
   0.931
eif2b4
Eukaryotic translation initiation factor 2B, subunit 4 delta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.928
eif2b5
Eukaryotic translation initiation factor 2B, subunit 5 epsilon.
    
   0.920
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
      
 0.832
LOC103464516
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.748
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.748
GNB4
G protein subunit beta 4.
    
 0.748
LOC103475780
WD_REPEATS_REGION domain-containing protein.
    
 0.748
ENSPREP00000005958
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.727
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.