STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1057 aa)    
Predicted Functional Partners:
GPR149
G protein-coupled receptor 149.
   
 0.870
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.846
ENSPREP00000021383
GUCT domain-containing protein.
   
 0.829
ddx1
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
   
 0.827
DDX41
DEAD-box helicase 41.
   
 0.798
irf7
Interferon regulatory factor 7.
     
 0.765
ENSPREP00000015831
Uncharacterized protein.
   
 0.757
ENSPREP00000015870
Uncharacterized protein.
   
 0.757
ENSPREP00000015917
EH domain-containing protein.
   
 0.757
itsn2
Intersectin 2a.
   
 0.757
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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