STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mettl11bMethyltransferase like 11B. (279 aa)    
Predicted Functional Partners:
LOC103479309
Kinesin-associated protein 3b.
      
 0.670
ENSPREP00000022865
Cnn_1N domain-containing protein.
      
 0.657
drg1
Developmentally regulated GTP binding protein 1.
   
   0.633
LOC103461963
Uncharacterized protein.
   
  
 0.620
kifap3
Kinesin-associated protein 3a.
      
 0.615
slc25a24
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.609
ENSPREP00000013968
Uncharacterized protein.
   
  
 0.599
prss56
Serine protease 56; Belongs to the peptidase S1 family.
      
 0.598
mettl17
Methyltransferase like 17.
      
 0.587
LOC103480677
FERM domain-containing protein.
      
 0.586
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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