STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r7Protein phosphatase 1, regulatory (inhibitor) subunit 7. (345 aa)    
Predicted Functional Partners:
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
   
 
 0.976
ppp1r2
Protein phosphatase 1, regulatory (inhibitor) subunit 2.
   
 
 0.952
ppp1r8
Protein phosphatase 1, regulatory subunit 8b.
   
 
 0.943
nsfl1c
NSFL1 (p97) cofactor (p47).
   
 
 0.940
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.938
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.938
ppp1r16b
Protein phosphatase 1, regulatory subunit 16B.
    
 0.916
LOC103471051
Uncharacterized protein.
    
   0.896
LOC103475450
Zgc:100829.
    
   0.896
LOC103468963
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.858
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.