Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
tent2Terminal nucleotidyltransferase 2. (395 aa)    
Predicted Functional Partners:
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
   
 
 0.933
sympk
Symplekin.
   
 0.813
papolg
Poly(A) polymerase gamma.
   
 
 0.794
xrn2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
      
 0.794
dnajc17
DnaJ (Hsp40) homolog, subfamily C, member 17.
      
 0.728
bccip
Protein BCCIP homolog; Belongs to the BCP1 family.
   
 
 0.711
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.689
surf6
Surfeit 6.
   
 
 0.682
tbc1d31
TBC1 domain family, member 31.
      
 0.631
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.590
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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