STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004255ANK_REP_REGION domain-containing protein. (314 aa)    
Predicted Functional Partners:
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.676
sdhaf1
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.644
HLCS
Holocarboxylase synthetase.
      
 0.549
LOC103479635
Death domain-containing protein.
   
 0.543
prodh2
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
   
  
 0.542
themis2
Thymocyte selection associated family member 2.
    
 
 0.528
TMEM43
Uncharacterized protein.
      
 0.522
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.522
bahd1
Bromo adjacent homology domain containing 1.
      
 0.495
ift81
Intraflagellar transport 81 homolog.
    
 0.493
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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