STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460558Uncharacterized protein. (980 aa)    
Predicted Functional Partners:
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
 0.913
LOC103481634
Uncharacterized protein.
   
0.902
LOC103462623
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.
   
0.890
LOC103472853
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
0.890
LOC103478060
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b.
   
0.890
LOC103468798
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.
   
0.890
grin2b
Uncharacterized protein.
   
0.890
grin2a
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a.
   
0.890
LOC103469050
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
   
0.880
LOC103458409
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
 0.878
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.