LOC103479600 protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103479600

Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (757 aa)

Predicted Functional Partners:

LOC103456751

0.965

LOC103479192

0.961

Tfr2

0.632

LOC108167061

0.627

epo

0.622

LOC103477846

0.542

srprb

0.538

LOC103475468

0.501

LOC103475843

0.497

cask

0.497

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103456751	LOC103479192	ENSPREP00000033982	ENSPREP00000004593	Transferrin receptor 1b.	Transferrin receptor 1a.	0.902
LOC103456751	LOC103479600	ENSPREP00000033982	ENSPREP00000004288	Transferrin receptor 1b.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.965
LOC103456751	epo	ENSPREP00000033982	ENSPREP00000022483	Transferrin receptor 1b.	Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.	0.402
LOC103475468	LOC103479600	ENSPREP00000025726	ENSPREP00000004288	Uncharacterized protein; Belongs to the peptidase S1 family.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.501
LOC103475843	LOC103479600	ENSPREP00000013706	ENSPREP00000004288	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.497
LOC103475843	cask	ENSPREP00000013706	ENSPREP00000030734	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	Uncharacterized protein; Belongs to the MAGUK family.	0.761
LOC103477846	LOC103479600	ENSPREP00000006736	ENSPREP00000004288	Apolipoprotein A-II.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.542
LOC103479192	LOC103456751	ENSPREP00000004593	ENSPREP00000033982	Transferrin receptor 1a.	Transferrin receptor 1b.	0.902
LOC103479192	LOC103479600	ENSPREP00000004593	ENSPREP00000004288	Transferrin receptor 1a.	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	0.961
LOC103479192	LOC108167061	ENSPREP00000004593	ENSPREP00000004617	Transferrin receptor 1a.	Uncharacterized protein.	0.481
LOC103479192	epo	ENSPREP00000004593	ENSPREP00000022483	Transferrin receptor 1a.	Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.	0.402
LOC103479600	LOC103456751	ENSPREP00000004288	ENSPREP00000033982	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Transferrin receptor 1b.	0.965
LOC103479600	LOC103475468	ENSPREP00000004288	ENSPREP00000025726	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.501
LOC103479600	LOC103475843	ENSPREP00000004288	ENSPREP00000013706	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.	0.497
LOC103479600	LOC103477846	ENSPREP00000004288	ENSPREP00000006736	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Apolipoprotein A-II.	0.542
LOC103479600	LOC103479192	ENSPREP00000004288	ENSPREP00000004593	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Transferrin receptor 1a.	0.961
LOC103479600	LOC108167061	ENSPREP00000004288	ENSPREP00000004617	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Uncharacterized protein.	0.627
LOC103479600	Tfr2	ENSPREP00000004288	ENSPREP00000014802	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Uncharacterized protein.	0.632
LOC103479600	cask	ENSPREP00000004288	ENSPREP00000030734	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Uncharacterized protein; Belongs to the MAGUK family.	0.497
LOC103479600	epo	ENSPREP00000004288	ENSPREP00000022483	Serotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.	Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.	0.622

page 1 of 2

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About