STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
esrp2Epithelial splicing regulatory protein 2. (747 aa)    
Predicted Functional Partners:
RBPMS
RNA binding protein, mRNA processing factor.
    
 
 0.847
srsf10
RRM domain-containing protein.
    
 0.573
LOC103461037
RAN binding protein 2.
    
   0.560
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.547
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
     
 0.543
QKI
QKI, KH domain containing, RNA binding 2.
    
 0.512
LOC103458862
QKI, KH domain containing, RNA binding a.
    
 0.512
ENSPREP00000012814
Uncharacterized protein.
     
 0.479
sf3b4
Splicing factor 3b, subunit 4.
    
 
 0.443
mrpl13
Mitochondrial ribosomal protein L13.
    
 
 0.431
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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