STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nptx1Uncharacterized protein. (422 aa)    
Predicted Functional Partners:
ENSPREP00000022871
PKD domain-containing protein.
   
  
 0.732
LOC103471319
Bicaudal C homolog 2.
      
 0.724
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 
 0.640
LOC103470494
Uncharacterized protein.
   
 
 0.640
nptxr
Neuronal pentraxin receptor b.
   
   0.617
LOC103468549
Neuronal pentraxin receptor a.
   
   0.617
opa1
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
   0.611
LOC103467296
Makorin, ring finger protein, 4.
    
 
 0.603
mkrn1
Makorin, ring finger protein, 1.
    
 
 0.601
mkrn2
Makorin, ring finger protein, 2.
    
 
 0.601
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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