STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457523Si:dkey-17e16.9. (643 aa)    
Predicted Functional Partners:
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 0.663
cotl1
Coactosin-like F-actin binding protein 1.
    
 
 0.545
ints9
Integrator complex subunit 9.
    
 0.520
ints1
Integrator complex subunit 1.
    
 0.515
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
  0.513
ints11
Integrator complex subunit 11.
    
 0.505
ENSPREP00000026079
Integrator complex subunit 4.
    
 0.497
ints7
Integrator complex subunit 7.
    
 0.490
ints3
Integrator complex subunit 3.
    
 0.490
ints13
Integrator complex subunit 13.
    
 0.488
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.