STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457523Si:dkey-17e16.9. (643 aa)    
Predicted Functional Partners:
LOC103480141
Arachidonate 12-lipoxygenase.
  
  
 
0.933
LOC103457519
Uncharacterized protein.
  
  
 
0.931
LOC103457522
Si:dkey-17e16.9.
  
  
 
0.930
GPX4
Glutathione peroxidase 4.
    
 0.911
LOC103479268
Glutathione peroxidase 4b.
    
 0.911
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
 0.857
cotl1
Coactosin-like F-actin binding protein 1.
    
 
 0.831
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
  0.677
rnf215
Ring finger protein 215.
    
 
 0.580
ints1
Integrator complex subunit 1.
    
 0.518
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.