STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
reep3Receptor expression-enhancing protein. (262 aa)    
Predicted Functional Partners:
LOC103458924
Receptor expression-enhancing protein.
    
 
 0.845
reep2
Receptor expression-enhancing protein.
    
 
 0.804
ENSPREP00000023716
Uncharacterized protein.
    
 
 0.671
c2cd2
C2 calcium dependent domain containing 2.
      
 0.670
sdhaf1
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.657
nbas
Neuroblastoma amplified sequence.
      
 0.650
ENSPREP00000004786
AF4/FMR2 family, member 2.
    
 
 0.609
aff3
AF4/FMR2 family, member 3.
    
 
 0.609
htr2a
5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a.
      
 0.606
cttnbp2
Cortactin binding protein 2.
      
 0.604
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.