Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem50aTransmembrane protein 50A. (160 aa)    
Predicted Functional Partners:
LEPROT
Leptin receptor overlapping transcript.
   
 
 0.929
leprotl1
Leptin receptor overlapping transcript like 1.
   
 
 0.929
chmp3
Charged multivesicular body protein 3.
    
 
 0.875
LOC103458645
Rh blood group, D antigen.
      
 0.778
syf2
SYF2 pre-mRNA-splicing factor.
      
 0.768
rsrp1
Arginine/serine-rich protein 1.
      
 0.768
znf407
Zinc finger protein 407.
      
 0.728
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.668
maco1
Macoilin 1b.
 
    
 0.662
SPIDR
Scaffold protein involved in DNA repair.
      
 0.662
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.