STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466886PID domain-containing protein. (194 aa)    
Predicted Functional Partners:
LOC103465345
Low density lipoprotein receptor-related protein 1Aa.
    
  0.922
ENSPREP00000030522
Uncharacterized protein.
    
  0.922
MEGF11
Multiple EGF like domains 11.
    
 0.913
Stab1
Link domain-containing protein.
    
 0.913
megf11
Multiple EGF-like-domains 11.
    
 0.913
scarf1
Scavenger receptor class F, member 1.
    
 0.913
RAC1
Rac family small GTPase 1.
    
 0.902
LOC103481975
Uncharacterized protein.
    
 0.902
gulp1
GULP PTB domain containing engulfment adaptor 1a.
     
 
0.900
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.648
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.