STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103471064Interleukin 1 receptor accessory protein-like 2. (678 aa)    
Predicted Functional Partners:
PTPRD
Uncharacterized protein.
    
 0.527
PTPRD-2
Protein tyrosine phosphatase receptor type D.
    
 0.527
ptprf
Protein tyrosine phosphatase receptor type Fb.
    
 0.512
ENSPREP00000028621
Uncharacterized protein.
    
 0.512
ENSPREP00000028631
Fibronectin type-III domain-containing protein.
    
 0.512
ENSPREP00000028643
Uncharacterized protein.
    
 0.512
LOC103463439
Protein tyrosine phosphatase receptor type Sa.
    
 0.506
LOC103479283
Protein tyrosine phosphatase receptor type Sa.
    
 0.506
ptpre
Receptor-type tyrosine-protein phosphatase.
    
 0.444
LOC103476767
Receptor-type tyrosine-protein phosphatase.
    
 0.444
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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