STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cenphCENP-H domain-containing protein. (238 aa)    
Predicted Functional Partners:
ENSPREP00000000618
Centromere protein K.
   
  0.900
nuf2
UF2 component of NDC80 kinetochore complex.
   
 
 0.763
cenpn
Centromere protein N.
   
 0.682
cenpm
Proliferation associated nuclear element.
   
   0.679
spc25
SPC25 component of NDC80 kinetochore complex.
   
 
 0.613
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
  0.594
ndc80
NDC80 kinetochore complex component.
   
 
 0.574
incenp
Uncharacterized protein.
   
  
 0.558
smc2
Structural maintenance of chromosomes protein.
   
    0.515
cdca3
Si:ch211-69g19.2.
   
    0.511
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.