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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4gat1Beta-1,4-glucuronyltransferase 1. (431 aa)    
Predicted Functional Partners:
LOC103459554
Uncharacterized protein.
    
0.972
LOC103462993
LARGE xylosyl- and glucuronyltransferase 2.
    
0.972
rxylt1
Ribitol xylosyltransferase 1.
   
 
 0.961
pomk
Protein O-mannose kinase.
    
 
 0.632
b3galnt2
Hexosyltransferase.
     
 0.627
Pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.624
pomt1
Protein-O-mannosyltransferase 1.
    
 
 0.558
fkrp
Fukutin related protein.
    
 
 0.558
fktn
Fukutin.
    
 
 0.557
pomt2
Protein-O-mannosyltransferase 2.
    
 
 0.556
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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