STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004399CNH domain-containing protein. (225 aa)    
Predicted Functional Partners:
ENSPREP00000018325
Protein kinase domain-containing protein.
 
   
  0.989
stk25
Serine/threonine kinase 25b.
 
  
   0.895
LOC103458062
Serine/threonine kinase 24.
 
  
   0.893
stk24
Serine/threonine kinase 24b (STE20 homolog, yeast).
 
  
   0.891
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
 
 
    0.889
LOC103464816
Uncharacterized protein.
 
 
    0.889
LOC103480673
Serine/threonine protein kinase 26.
 
  
   0.883
PAK6
P21 protein (Cdc42/Rac)-activated kinase 6b.
 
 
    0.843
pak1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
 
 
    0.736
LOC103458433
Non-specific serine/threonine protein kinase.
 
 
    0.708
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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