STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468827BTB (POZ) domain containing 17b. (575 aa)    
Predicted Functional Partners:
ttc13
Tetratricopeptide repeat domain 13.
    
 0.585
kif19
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.515
ubxn7
UBX domain protein 7.
    
  0.509
lrrcc1
Leucine rich repeat and coiled-coil centrosomal protein 1.
     
 0.497
bbs9
Bardet-Biedl syndrome 9.
    
 0.486
Cdc42ep5
CDC42 effector protein (Rho GTPase binding) 5.
    
 
 0.472
ttc8
Tetratricopeptide repeat domain 8.
    
 0.441
bbs7
Bardet-Biedl syndrome 7.
    
 0.418
LOC103470579
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.412
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.