STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acheCarboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (616 aa)    
Predicted Functional Partners:
LOC103481435
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.930
chat
Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.
     
 0.930
LOC103459627
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
  
 
0.911
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.911
LOC103466273
Choline kinase alpha.
     
 0.902
chkb
Choline kinase beta.
     
 0.902
Phospho1
Phosphatase, orphan 1.
     
  0.900
ENSPREP00000033037
Uncharacterized protein.
     
  0.900
app
Amyloid beta (A4) precursor protein a.
    
 0.694
LOC103459816
Amyloid beta (A4) precursor protein b.
    
 0.694
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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