STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pfdn2Prefoldin subunit 2. (148 aa)    
Predicted Functional Partners:
vbp1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
 0.999
pfdn6
Prefoldin subunit 6.
   
 0.999
pfdn1
Prefoldin subunit 1.
   
 0.998
pfdn5
Prefoldin 5.
   
 0.998
pfdn4
Prefoldin subunit 4.
    
 0.998
pdrg1
P53 and DNA-damage regulated 1.
    
 0.911
uri1
URI1 prefoldin like chaperone.
    
 
 0.883
cct2
Chaperonin containing TCP1, subunit 2 (beta).
   
 0.881
uxt
Ubiquitously-expressed, prefoldin-like chaperone.
    
 
 0.870
rpap3
RNA polymerase II associated protein 3.
    
 
 0.864
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.