STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pfdn2Prefoldin subunit 2. (148 aa)    
Predicted Functional Partners:
pfdn6
Prefoldin subunit 6.
   
 0.999
pfdn1
Prefoldin subunit 1.
   
 0.998
vbp1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.
   
 0.998
pfdn5
Prefoldin 5.
   
 0.998
pfdn4
Prefoldin subunit 4.
   
 0.997
pdrg1
P53 and DNA-damage regulated 1.
    
 0.992
uri1
URI1 prefoldin like chaperone.
    
 
 0.990
POLR2E
RNA polymerase II subunit E.
   
 
 0.988
uxt
Ubiquitously-expressed, prefoldin-like chaperone.
   
 
 0.985
rpap3
RNA polymerase II associated protein 3.
    
 
 0.982
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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