STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000004409Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
clg10h4orf47
Zgc:153146.
   
 
 0.885
LOC103472032
Hippocalcin like 4.
    
 0.699
tmem33
Transmembrane protein 33.
      
 0.688
ccnh
Cyclin H; Belongs to the cyclin family.
      
 0.676
cfap45
Cilia and flagella associated protein 45.
   
   0.670
drc3
Dynein regulatory complex subunit 3.
   
 
 0.669
ppil6
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.668
LOC103479189
RIIa domain-containing protein.
   
   0.665
LOC103466129
Uncharacterized protein.
   
   0.665
Pacrg
PARK2 co-regulated.
   
   0.656
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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